[maker-devel] CEGMA Question

[Carson Holt]

Thanks Genis.  I guess this should answer you question Daniel.

Thanks,
Carson


On 1/18/10 11:54 AM, "Genis Parra" <genparra at ucdavis.edu> wrote:

Hi Carson,

This paper addresses the problems you are interested in:

Assessing the gene space in draft genomes
http://nar.oxfordjournals.org/cgi/content/abstract/37/1/289

Let me know if you have any other question.

Genis

On Mon, Jan 18, 2010 at 1:32 PM, Daniel Standage <byuhobbes at gmail.com> wrote:
> Carson,
>
> During your presentation at PAG, you mentioned the CEGMA software package
> that identifies the locations of a set of highly conserved eukaryotic genes
> in a genome assembly. If I remember correctly, you said that this program
> could be used to compare and/or resolve differences between assemblies
> generated by difference software packages. I breezed over the 2007
> Bioinformatics paper on CEGMA and this application of CEGMA was not
> apparently clear to me. Did I miss something from the paper or is this a
> novel application of CEGMA or did I simply misunderstand you at PAG?
>
> Thanks!
>
> Daniel Standage
> Research Assistant
> Plant Genetics Lab
> Brigham Young University
>
> _______________________________________________
> maker-devel mailing list
> maker-devel at yandell-lab.org
> http://yandell-lab.org/mailman/listinfo/maker-devel_yandell-lab.org
>
>

_______________________________________________
maker-devel mailing list
maker-devel at yandell-lab.org
http://yandell-lab.org/mailman/listinfo/maker-devel_yandell-lab.org

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://yandell-lab.org/pipermail/maker-devel_yandell-lab.org/attachments/20100118/f3721e20/attachment.html>