[maker-devel] RepeatMasker Species Option

Daniel Standage byuhobbes at gmail.com
Thu Oct 22 16:35:53 MDT 2009


I spent a bit of time today trying to find an exhaustive list of species
options for RepeatMasker, but after re-reading the help statement, it looks
like the species options available to you depend on your repeat database.
Does this mean I have to scrape the database files to see what species are
included? Any suggestions about how to get a list of available species
options?  FYI, we want to run maker with a fungal genome.

Thanks!

Daniel Standage
Plant Genetics Lab
Brigham Young University
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