[maker-devel] Question on BLAST/Gbrowse

[Shane Brubaker]

Hi, I'm sorry if this is not directly related to MAKER, but I was wondering if anyone knows of a product for setting up a BLAST web site that then gives you links to scaffolds/annotations that are in GBrowser (from MAKER).

We have a genome with a bunch of scaffolds, and it is unlikely someone would want to browse through them.  Instead the scientists want to blast a gene and then get a link to that scaffold/location.

Is there any open source code out there for doing this?


Thanks,
Shane

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