[maker-devel] protein2genome question

Brant Peterson brantp at gmail.com
Thu Apr 9 06:00:37 MDT 2009


Maker folks,

I'm seeing some fairly real-looking hits turning up in protein2genome
results that aren't being put together and promoted to 'maker' gene
annotations, and I was wondering if there's a setting in maker
somewhere to do so.  It seems straightforward to hack this on ex post
facto, something like "take all protein2fasta hits, and make a new
parent gene with hits as exons if hits are to the same protein and
consecutive", but it seems like the sort of thing that maker probably
already does, and I just don't have it configured properly.

Thank you for your help!
-Brant



More information about the maker-devel mailing list